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There are several matches for 'protein RbsB'.
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492 matches
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organism
protein
1)
Stappia sp. 22IIS9Z10
ORE94611.1 -
Protein
RbsB
; COG1879 ABC-type sugar transport system, periplasmic component.
[a.k.a. ATO13_11066,
protein RbsB
,
Protein RbsB
]
2)
Yersinia pestis
YPO3962 - Sugar-binding transport
protein
; Similar to Bacillus subtilis D-ribose-binding
protein
precursor
RbsB
SW:
RBSB
_BACSU (P36949) (305 aa) fasta scores: E(): 1.4e-21, 35.1% id in 279 aa, and to Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
SW:
RBSB
_ECOLI (P02925) (296 aa) fasta scores: E(): 9.8e-20, 31.6% id in 297 aa.
[a.k.a. CAL22543.1, A0A384LJC9_YERPE, Q74QX7]
3)
Pectobacterium atrosepticum
rbsB - Ribose-binding periplasmic
protein
; Similar to Salmonella typhimurium, and Salmonella typhi D-ribose-binding periplasmic
protein
precursor
RbsB
SWALL:
RBSB
_SALTY (SWALL:P02926) (296 aa) fasta scores: E(): 4.9e-82, 84.4% id in 295 aa, and to Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
SWALL:
RBSB
_ECOLI (SWALL:P02925) (296 aa) fasta scores: E(): 1.8e-81, 84.06% id in 295 aa.
[a.k.a. ECA0013, CAG72937.1, Q6DB85]
4)
Mycobacterium leprae
ML0398 - Similar to many D-ribose-binding
proteins
e.g. Bacillus subtilis
rbsB
, D-ribose-binding
protein
precursor, SW:
RBSB
_BACSU (P36949) (305 aa); Fasta score E(): 2e-16, 32.6% identity in 273 aa overlap. Previously sequenced as TR:Q49738 (EMBL:U00015) (345 aa); Fasta score E(): 0, 100.0% identity in 345 aa overlap. Contains probable N-terminal signal sequence. Contains Pfam match to entry PF00532 Peripla_BP_like, Periplasmic binding
proteins
and sugar binding domain of the LacI family.
[a.k.a. CAC29906.1, gene:17574217, Putative D-ribose-binding protein]
5)
Yersinia pestis
rbsB-2 - Putative sugar ABC transporter, periplasmic
protein
; Similar to Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
or RbsP or PrlB SW:
RBSB
_ECOLI (P02925) (296 aa) fasta scores: E(): 1.2e-23,31.7% id in 300 aa, and identical to the previously sequenced Yersinia pestis D-ribose binding
protein
RbsB
TR:Q9X6A9 (EMBL:AF135170) (324 aa) fasta scores: E(): 0,100.0% id in 324 aa.
[a.k.a. CAL21909.1, YPO3318, NC_003143.1]
6)
Streptomyces coelicolor
SCO6979 - SC8F11.05, probable solute-binding lipoprotein, len: 340 aa. Highly similar to many sugar transport
proteins
including Bacillus subtilis SW:
RBSB
_BACSU(EMBL:Z92953) D-ribose-binding
protein
precursor,
RbsB
(305 aa), fasta scores opt: 222 z-score: 243.9 E(): 3.7e-06 23.0% identity in 256 aa overlap and several examples from Streptomyces coelicolor e.g. TR:Q9X837(EMBL:AL049727) putative secreted solute binding
protein
, SC9B1.17C (337 aa), fasta scores opt: 1281 z-score: 1360.6 E():0 59.1% identity in 328 aa overlap. Contains a possible N-terminal signal sequence and an appropriately posit [...]
[a.k.a. gene:17764638, CAB88956.1, CAB88956]
7)
Streptomyces coelicolor
SCO0808 - SCF43.19c, possible secreted solute-binding lipoprotein, len: 360 aa. Similar to many bacterial extracellular solute-binding
proteins
including: Bacillus subtilis SW:
RBSB
_BACSU(EMBL:Z92953) D-ribose-binding
protein
precursor,
RbsB
(305 aa), fasta scores opt: 234 z-score: 252.1 E(): 1.2e-06 24.9% identity in 277 aa overlap and Streptomyces coelicolor TR:CAB56679(EMBL:AL121596) possible secreted solute-binding lipoprotein SCF51A.27 (359 aa), fasta scores opt: 1487 z-score: 1547.8 E(): 0 63.1% identity in 360 aa overlap. Contains an appropriately positioned Prosite hit to PS00013 Prokaryo [...]
[a.k.a. gene:17758391, CAB66208.1, CAB66208]
8)
Burkholderia pseudomallei
BPSS1033 - Putative ABC periplasmic-binding sugar transport
protein
; Similar to Bacillus subtilis D-ribose-binding
protein
precursor
RbsB
SWALL:
RBSB
_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 2e-08, 24.02% id in 308 aa, and to Pseudomonas putida sugar-binding
protein
, putative pp2757 SWALL:AAN68365 (EMBL:AE016784) (323 aa) fasta scores: E(): 3.6e-61, 57.14% id in 322 aa, and to Pseudomonas putida ribose ABC transporter, periplasmic ribose-binding
protein
, putative pp2758 SWALL:AAN68366 (EMBL:AE016784) (342 aa) fasta scores: E(): 2.3e-60, 57.79% id in 308 aa, and to Yersinia pestis putative [...]
[a.k.a. CAH38494.1, CAH38494, Q63LI2]
9)
Azoarcus sp. BH72
sciE - Putative cytoplasmic
protein
,sciE, 37% identity(52% similarity) to TrEMBL;Q93IT1. Has PF07024, ImpE
protein
;This family consists of several bacterial
proteins
including ImpE (Q93EC9) from Rhizobium leguminosarum. It has been suggested that the imp locus is involved in the secretion to the environment of
proteins
, including periplasmic
RbsB
protein
, that cause blocking of infection specifically in pea plants.The exact function of this family is unknown; High confidence in function and specificity.
[a.k.a. azo3899, CAL96515.1, A1KCF9_AZOSB]
10)
Streptomyces albus
AMM07188.1 - Ribose ABC transport system permease
protein
RbsC/ribose-binding
protein
RbsB
.
[a.k.a. Salbus254_0634, AMM07188]
11)
Burkholderia pseudomallei
BPSS0786 - Similar to Salmonella typhimurium, and Salmonella typhi D-ribose-binding periplasmic
protein
precursor
RbsB
SWALL:
RBSB
_SALTY (SWALL:P02926) (296 aa) fasta scores: E(): 3e-14, 27.09% id in 299 aa, and to Rhizobium loti ABC transporter, binding
protein
mll8567 SWALL:Q982N3 (EMBL:AP003014) (346 aa) fasta scores: E(): 2e-14, 28.82% id in 340 aa. CDS is extended at the C-terminus in comparison to orthologues.
[a.k.a. CAH38246.1, Q63M76_BURPS, bps:BPSS0786]
12)
Yersinia pestis
YPO3908 - Similar to Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
SW:
RBSB
_ECOLI (P02925) (296 aa) fasta scores: E(): 5e-20, 34.3% id in 230 aa, and to Escherichia coli ABC transporter periplasmic binding
protein
YtfQ SW:YTFQ_ECOLI (P39325) (318 aa) fasta scores: E(): 0, 75.8% id in 318 aa.
[a.k.a. CAL22493.1, Putative periplasmic protein, NC_003143.1]
13)
Halomonas sp. KO116
AJY49360.1 - KEGG: ribose ABC transporter, periplasmic ribose-binding
protein
RbsB
; PFAM: Periplasmic binding
protein
domain.
[a.k.a. KO116_00861, NZ_CP011052.1, AJY49360]
14)
Yersinia pestis
YPO2285 - Similar to the C-terminal regions of Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
SW:
RBSB
_ECOLI (P02925) (296 aa) fasta scores: E(): 7.4e-15,35.359% id in 181 aa, and Rhizobium loti ribose ABC transporter, periplasmic ribose-binding
protein
MLL7014 TR:BAB53199 (EMBL:AP003010) (313 aa) fasta scores: E(): 1e-34, 53.266% id in 199 aa. The CDS appears to be truncated at the N-terminus, identity with other
proteins
extends upstream of the start codon. Probable gene remnant; was marked partial.
[a.k.a. CAL20913.1, Q0WEN6, CAL20913]
15)
Yersinia pestis
rbsB - Similar to Bacillus subtilis D-ribose-binding
protein
precursor
RbsB
SW:
RBSB
_BACSU (P36949) (305 aa) fasta scores: E(): 6.9e-28, 40.2% id in 276 aa, and to Bacillus halodurans possible ribose ABC transporter
RbsB
TR:Q9K6J7 (EMBL:AP001519) (311 aa) fasta scores: E(): 2.3e-25, 38.1% id in 268 aa.
[a.k.a. YPO2501, CAL21129.1, WP_002210223.1]
16)
Yersinia pestis
YPO1293 - Weakly similar to Vibrio cholerae ribose ABC transporter, periplasmic D-ribose-binding
protein
VCA0130 TR:Q9KN35 (EMBL:AE004354) (294 aa) fasta scores: E(): 8.6e-10, 29.0% id in 293 aa, and to Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
SW:
RBSB
_ECOLI (P02925) (296 aa) fasta scores: E(): 3.3e-09,26.5% id in 287 aa.
[a.k.a. CAL19947.1, WP_002208804.1, NZ_VWRZ01000018.1]
17)
Burkholderia pseudomallei
BPSS0140 - Similar to Escherichia coli O157:H7 putative periplasmic ribose-binding
protein
of ABC transport system z5689 or ecs5071 SWALL:Q8X5Q6 (EMBL:AE005642) (313 aa) fasta scores: E(): 3.9e-54, 54.27% id in 304 aa, and to Bacillus subtilis D-ribose-binding
protein
precursor
RbsB
SWALL:
RBSB
_BACSU (SWALL:P36949) (305 aa) fasta scores: E(): 1.6e-17, 31.31% id in 281 aa.
[a.k.a. CAH37585.1, putative sugar ABC transport system, lipoprotein, Sugar ABC transporter substrate-binding protein]
18)
Yersinia pestis
YPO0860 - Similar to Escherichia coli D-ribose-binding periplasmic
protein
precursor
RbsB
SW:
RBSB
_ECOLI (P02925) (296 aa) fasta scores: E(): 2.2e-17, 32.5% id in 295 aa,and to Bacillus halodurans sugar ABC transporter BH2323 TR:Q9KAG4 (EMBL:AP001515) (323 aa) fasta scores: E(): 2.6e-24, 36.3% id in 251 aa.
[a.k.a. CAL19530.1, Q0WIH7, NC_003143.1]
19)
Mycolicibacterium smegmatis
ABK69646.1 - D-ribose-binding periplasmic
protein
RbsB
; Identified by match to
protein
family HMM PF00532.
[a.k.a. MSMEG_4172, D-ribose-binding periplasmic protein RbsB, YP_888452.1]
20)
Rhizobium sp. CF080
EUB98686.1 - PFAM: Periplasmic binding
protein
domain; KEGG:
rbsB
, ABC transporter, substrate binding
protein
(ribose).
[a.k.a. PMI07_004967, W6W622, EUB98686]
492 matches
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